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    <title>Effect of intrinsic curvature on semiflexible polymers</title>
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    <description>Author(s): Surya K. Ghosh, Kulveer Singh, and Anirban Sain&lt;br/&gt;Recently many important biopolymers have been found to possess intrinsic curvature. Tubulin protofilaments in animal cells, FtsZ filaments in bacteria and double stranded DNA are examples. We examine how intrinsic curvature influences the conformational statistics of such polymers. We give exact res...&lt;br/&gt;[Phys. Rev. E 80, 051904] Published Thu Nov 05, 2009</description>
    <dc:creator>Surya K. Ghosh, Kulveer Singh, and Anirban Sain</dc:creator>
    <dc:date>2009-11-05T00:00:00-05:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
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    <title>Order-disorder effects in structure and color relation of photonic-crystal-type nanostructures in butterfly wing scales</title>
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    <description>Author(s): G&#233;za I. M&#225;rk, Zofia V&#233;rtesy, Kriszti&#225;n Kert&#233;sz, Zsolt B&#225;lint, and L&#225;szl&#243; P. Bir&#243;&lt;br/&gt;In order to study local and global order in butterfly wing scales possessing structural colors, we have developed a direct space algorithm, based on averaging the local environment of the repetitive units building up the structure. The method provides the statistical distribution of the local enviro...&lt;br/&gt;[Phys. Rev. E 80, 051903] Published Thu Nov 05, 2009</description>
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    <dc:date>2009-11-05T00:00:00-05:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
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    <description>Author(s): Dezhe Z. Jin&lt;br/&gt;Songs of songbird species such as Bengalese finch consist of sequences of syllables. While syllables are temporally stereotypical, syllable sequences can vary and follow complex, probabilistic transition rules. Recent experiments and computational models suggest that a syllable is encoded in a chain...&lt;br/&gt;[Phys. Rev. E 80, 051902] Published Thu Nov 05, 2009</description>
    <dc:creator>Dezhe Z. Jin</dc:creator>
    <dc:date>2009-11-05T00:00:00-05:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
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    <description>Author(s): Wei Zhang, Rong Yang, and Sergio E. Ulloa&lt;br/&gt;Charge transport in DNA molecules has raised considerable interest because of its importance in biological processes and potential applications in nanoscale devices. A DNA molecule can be viewed as a quasi-one-dimensional system composed of stacked base pairs ( AT , CG ) together with backbones of s...&lt;br/&gt;[Phys. Rev. E 80, 051901] Published Wed Nov 04, 2009</description>
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    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
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    <description>Author(s): Akinori Awazu and Kunihiko Kaneko&lt;br/&gt;Study of reversible catalytic reaction networks is important not only as an issue for chemical thermodynamics but also for protocells. From extensive numerical simulations and theoretical analysis, slow relaxation dynamics to sustain nonequlibrium states are commonly observed. These dynamics show tw...&lt;br/&gt;[Phys. Rev. E 80, 041931] Published Fri Oct 30, 2009</description>
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    <dc:date>2009-10-30T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041931</dc:identifier>
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    <title>Simple model for bursting dynamics of neurons</title>
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    <description>Author(s): Anandamohan Ghosh, Dipanjan Roy, and Viktor K. Jirsa&lt;br/&gt;Neuronal cells in isolation or as an assembly exhibit bursting behavior on two different time scales. We introduce a simple one-dimensional model which requires only one phase variable to describe the phenomenon of parabolic bursting. The analysis in the continuum limit reveals that for any unimodal...&lt;br/&gt;[Phys. Rev. E 80, 041930] Published Thu Oct 29, 2009</description>
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    <dc:date>2009-10-29T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041930</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041930</dc:source>
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  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041929" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Mechanical properties of interacting lipopolysaccharide membranes from bacteria mutants studied by specular and off-specular neutron scattering</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041929</link>
    <description>Author(s): Emanuel Schneck, Rafael G. Oliveira, Florian Rehfeldt, Bruno Dem&#233;, Klaus Brandenburg, Ulrich Seydel, and Motomu Tanaka&lt;br/&gt;Specular and off-specular neutron scattering are used to study the influence of molecular chemistry (mutation) on the intermembrane interactions and mechanical properties of the outer membrane of Gram-negative bacteria consisting of lipopolysaccharides (LPSs). For this purpose, solid-supported multi...&lt;br/&gt;[Phys. Rev. E 80, 041929] Published Wed Oct 28, 2009</description>
    <dc:creator>Emanuel Schneck, Rafael G. Oliveira, Florian Rehfeldt, Bruno Dem&#233;, Klaus Brandenburg, Ulrich Seydel, and Motomu Tanaka</dc:creator>
    <dc:date>2009-10-28T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041929</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041929</dc:source>
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    <title>Traffic by multiple species of molecular motors</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041928</link>
    <description>Author(s): Yan Chai, Stefan Klumpp, Melanie J. I. M&#252;ller, and Reinhard Lipowsky&lt;br/&gt;We study the traffic of two types of molecular motors using the two-species asymmetric simple exclusion process (ASEP) with periodic boundary conditions and with attachment and detachment of particles. We determine characteristic properties such as motor densities and currents by simulations and ana...&lt;br/&gt;[Phys. Rev. E 80, 041928] Published Wed Oct 28, 2009</description>
    <dc:creator>Yan Chai, Stefan Klumpp, Melanie J. I. M&#252;ller, and Reinhard Lipowsky</dc:creator>
    <dc:date>2009-10-28T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041928</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041928</dc:source>
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    <prism:publicationName>Physical Review E</prism:publicationName>
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    <title>Self-assembly of polypeptides into left-handedly twisted fibril-like structures</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041927</link>
    <description>Author(s): Yan Mu and Yi Qin Gao&lt;br/&gt;In this paper, we investigated the spontaneous formation of aggregation structures of amyloid-forming peptide (GGVVIA) using a coarse-grained model and Monte Carlo simulations. The effects of concentration and temperature on the formation of different aggregation structures were studied. Three types...&lt;br/&gt;[Phys. Rev. E 80, 041927] Published Mon Oct 26, 2009</description>
    <dc:creator>Yan Mu and Yi Qin Gao</dc:creator>
    <dc:date>2009-10-26T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041927</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041927</dc:source>
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    <prism:publicationName>Physical Review E</prism:publicationName>
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    <prism:publicationDate>2009-10-26T00:00:00-04:00</prism:publicationDate>
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    <dc:subject>Biological physics</dc:subject>
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    <title>Topological phase transition in a RNA model in the de Gennes regime</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041926</link>
    <description>Author(s): Mat&#237;as G. dell&#8217;Erba and Guillermo R. Zemba&lt;br/&gt;We study a simplified model of the RNA molecule proposed by Vernizzi in the regime of strong concentration of positive ions in solution. The model considers a flexible chain of equal bases that can pairwise interact with any other one along the chain while preserving the property of saturation of th...&lt;br/&gt;[Phys. Rev. E 80, 041926] Published Fri Oct 23, 2009</description>
    <dc:creator>Mat&#237;as G. dell&#8217;Erba and Guillermo R. Zemba</dc:creator>
    <dc:date>2009-10-23T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041926</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041926</dc:source>
    <dc:format>text/html</dc:format>
    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
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    <prism:publicationDate>2009-10-23T00:00:00-04:00</prism:publicationDate>
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    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
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  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041925" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Ionic conductivity on a wetting surface</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041925</link>
    <description>Author(s): Brian Skinner, M. S. Loth, and B. I. Shklovksii&lt;br/&gt;Recent experiments measuring the electrical conductivity of DNA molecules highlight the need for a theoretical model of ion transport along a charged surface. Here we present a simple theory based on the idea of unbinding of ion pairs. The strong humidity dependence of conductivity is explained by t...&lt;br/&gt;[Phys. Rev. E 80, 041925] Published Fri Oct 23, 2009</description>
    <dc:creator>Brian Skinner, M. S. Loth, and B. I. Shklovksii</dc:creator>
    <dc:date>2009-10-23T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041925</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041925</dc:source>
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    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
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  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041924" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Phase coexistence and line tension in ternary lipid systems</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041924</link>
    <description>Author(s): T. Idema, J. M. J. van Leeuwen, and C. Storm&lt;br/&gt;The ternary system consisting of cholesterol, a saturated lipid, and an unsaturated one exhibits a rich phase behavior with multiple phase coexistence regimes. Remarkably, phase separation even occurs when each of the three binary systems consisting of two of these components is a uniform mixture. W...&lt;br/&gt;[Phys. Rev. E 80, 041924] Published Fri Oct 23, 2009</description>
    <dc:creator>T. Idema, J. M. J. van Leeuwen, and C. Storm</dc:creator>
    <dc:date>2009-10-23T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041924</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041924</dc:source>
    <dc:format>text/html</dc:format>
    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
    <prism:volume>80</prism:volume>
    <prism:issueIdentifier>4</prism:issueIdentifier>
    <prism:publicationDate>2009-10-23T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041924</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041923" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Force-velocity relations for multiple-molecular-motor transport</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041923</link>
    <description>Author(s): Ziqing Wang and Ming Li&lt;br/&gt;A transition rate model of cargo transport by N molecular motors is proposed. Under the assumption of steady state, the force-velocity curve of multimotor system can be derived from the force-velocity curve of a single motor. Our work shows, in the case of low load, that the velocity of multimotor s...&lt;br/&gt;[Phys. Rev. E 80, 041923] Published Thu Oct 22, 2009</description>
    <dc:creator>Ziqing Wang and Ming Li</dc:creator>
    <dc:date>2009-10-22T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041923</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041923</dc:source>
    <dc:format>text/html</dc:format>
    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
    <prism:volume>80</prism:volume>
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    <prism:publicationDate>2009-10-22T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041923</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041922" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Three-dimensional model for the effective viscosity of bacterial suspensions</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041922</link>
    <description>Author(s): Brian M. Haines, Andrey Sokolov, Igor S. Aranson, Leonid Berlyand, and Dmitry A. Karpeev&lt;br/&gt;We derive the effective viscosity of dilute suspensions of swimming bacteria from the microscopic details of the interaction of an elongated body with the background flow. An individual bacterium propels itself forward by rotating its flagella and reorients itself randomly by tumbling. Due to the ba...&lt;br/&gt;[Phys. Rev. E 80, 041922] Published Thu Oct 22, 2009</description>
    <dc:creator>Brian M. Haines, Andrey Sokolov, Igor S. Aranson, Leonid Berlyand, and Dmitry A. Karpeev</dc:creator>
    <dc:date>2009-10-22T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041922</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041922</dc:source>
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    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
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    <prism:publicationDate>2009-10-22T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041922</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
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  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041921" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Spectral solutions to stochastic models of gene expression with bursts and regulation</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041921</link>
    <description>Author(s): Andrew Mugler, Aleksandra M. Walczak, and Chris H. Wiggins&lt;br/&gt;Signal-processing molecules inside cells are often present at low copy number, which necessitates probabilistic models to account for intrinsic noise. Probability distributions have traditionally been found using simulation-based approaches which then require estimating the distributions from many s...&lt;br/&gt;[Phys. Rev. E 80, 041921] Published Tue Oct 20, 2009</description>
    <dc:creator>Andrew Mugler, Aleksandra M. Walczak, and Chris H. Wiggins</dc:creator>
    <dc:date>2009-10-20T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041921</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041921</dc:source>
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    <dc:type>article</dc:type>
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    <prism:startingPage>041921</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
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  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041920" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Analysis and Monte Carlo simulations of a model for the spread of infectious diseases in heterogeneous metapopulations</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041920</link>
    <description>Author(s): David Juher, Jordi Ripoll, and Joan Salda&#241;a&lt;br/&gt;We present a study of the continuous-time equations governing the dynamics of a susceptible-infected-susceptible model on heterogeneous metapopulations. These equations have been recently proposed as an alternative formulation for the spread of infectious diseases in metapopulations in a continuous-...&lt;br/&gt;[Phys. Rev. E 80, 041920] Published Tue Oct 20, 2009</description>
    <dc:creator>David Juher, Jordi Ripoll, and Joan Salda&#241;a</dc:creator>
    <dc:date>2009-10-20T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041920</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041920</dc:source>
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    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
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    <prism:publicationDate>2009-10-20T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041920</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
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  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.040903" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Rebuilding cytoskeleton roads: Active-transport-induced polarization of cells</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.040903</link>
    <description>Author(s): R. J. Hawkins, O. B&#233;nichou, M. Piel, and R. Voituriez&lt;br/&gt;Many cellular processes require a polarization axis which generally initially emerges as an inhomogeneous distribution of molecular markers in the cell. We present a simple analytical model of a general mechanism of cell polarization taking into account the positive feedback due to the coupled dynam...&lt;br/&gt;&lt;img src="http://prola.aps.org/graphics/rapid30x30.gif" width="30" height="30" alt="Rapid Communication"/&gt;&lt;br/&gt;[Phys. Rev. E 80, 040903] Published Mon Oct 19, 2009</description>
    <dc:creator>R. J. Hawkins, O. B&#233;nichou, M. Piel, and R. Voituriez</dc:creator>
    <dc:date>2009-10-19T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.040903</dc:identifier>
    <dc:source>Phys. Rev. E 80, 040903</dc:source>
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    <prism:startingPage>040903</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.040902" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Strong associations between microbe phenotypes and their network architecture</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.040902</link>
    <description>Author(s): Soumen Roy and Vladimir Filkov&lt;br/&gt;Understanding the dependence and interplay between architecture and function in biological networks has great relevance to disease progression, biological fabrication, and biological systems in general. We propose methods to assess the association of various microbe characteristics and phenotypes wi...&lt;br/&gt;&lt;img src="http://prola.aps.org/graphics/rapid30x30.gif" width="30" height="30" alt="Rapid Communication"/&gt;&lt;br/&gt;[Phys. Rev. E 80, 040902] Published Fri Oct 16, 2009</description>
    <dc:creator>Soumen Roy and Vladimir Filkov</dc:creator>
    <dc:date>2009-10-16T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.040902</dc:identifier>
    <dc:source>Phys. Rev. E 80, 040902</dc:source>
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    <prism:publicationName>Physical Review E</prism:publicationName>
    <prism:volume>80</prism:volume>
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    <prism:publicationDate>2009-10-16T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>040902</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.040901" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Discontinuities at the DNA supercoiling transition</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.040901</link>
    <description>Author(s): Bryan C. Daniels, Scott Forth, Maxim Y. Sheinin, Michelle D. Wang, and James P. Sethna&lt;br/&gt;While slowly turning the ends of a single molecule of DNA at constant applied force, a discontinuity was recently observed at the supercoiling transition when a small plectoneme is suddenly formed. This can be understood as an abrupt transition into a state in which stretched and plectonemic DNA coe...&lt;br/&gt;&lt;img src="http://prola.aps.org/graphics/rapid30x30.gif" width="30" height="30" alt="Rapid Communication"/&gt;&lt;br/&gt;[Phys. Rev. E 80, 040901] Published Thu Oct 15, 2009</description>
    <dc:creator>Bryan C. Daniels, Scott Forth, Maxim Y. Sheinin, Michelle D. Wang, and James P. Sethna</dc:creator>
    <dc:date>2009-10-15T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.040901</dc:identifier>
    <dc:source>Phys. Rev. E 80, 040901</dc:source>
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    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
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    <prism:publicationDate>2009-10-15T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>040901</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041919" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Micromagnetic insight into a magnetoreceptor in birds: Existence of magnetic field amplifiers in the beak</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041919</link>
    <description>Author(s): Ilia A. Solov&#8217;yov and Walter Greiner&lt;br/&gt;The Earth&#8217;s magnetic field provides an important source of directional information for many living organisms, especially birds, but the sensory receptor responsible for magnetic field detection still has to be identified. Recently, magnetic iron oxide particles were detected in dendritic endings o...&lt;br/&gt;[Phys. Rev. E 80, 041919] Published Wed Oct 14, 2009</description>
    <dc:creator>Ilia A. Solov&#8217;yov and Walter Greiner</dc:creator>
    <dc:date>2009-10-14T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041919</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041919</dc:source>
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    <prism:startingPage>041919</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
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  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041918" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Parameter effects on binding chemistry in crowded media using a two-dimensional stochastic off-lattice model</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041918</link>
    <description>Author(s): Byoungkoo Lee, Philip R. LeDuc, and Russell Schwartz&lt;br/&gt;The intracellular environment imposes a variety of constraints on biochemical reaction systems that can substantially change reaction rates and equilibria relative to an ideal solution-based environment. One of the most notable features of the intracellular environment is its dense macromolecular cr...&lt;br/&gt;[Phys. Rev. E 80, 041918] Published Wed Oct 14, 2009</description>
    <dc:creator>Byoungkoo Lee, Philip R. LeDuc, and Russell Schwartz</dc:creator>
    <dc:date>2009-10-14T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041918</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041918</dc:source>
    <dc:format>text/html</dc:format>
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    <prism:publicationDate>2009-10-14T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041918</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041917" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Finding human promoter groups based on DNA physical properties</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041917</link>
    <description>Author(s): Jia Zeng, Xiao-Qin Cao, Hongya Zhao, and Hong Yan&lt;br/&gt;DNA rigidity is an important physical property originating from the DNA three-dimensional structure. Although the general DNA rigidity patterns in human promoters have been investigated, their distinct roles in transcription are largely unknown. In this paper, we discover four highly distinct human ...&lt;br/&gt;[Phys. Rev. E 80, 041917] Published Tue Oct 13, 2009</description>
    <dc:creator>Jia Zeng, Xiao-Qin Cao, Hongya Zhao, and Hong Yan</dc:creator>
    <dc:date>2009-10-13T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041917</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041917</dc:source>
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    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
    <prism:volume>80</prism:volume>
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    <prism:publicationDate>2009-10-13T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041917</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041916" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Predictions from a stochastic polymer model for the MinDE protein dynamics in Escherichia coli</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041916</link>
    <description>Author(s): Peter Borowski and Eric N. Cytrynbaum&lt;br/&gt;The spatiotemporal oscillations of the Min proteins in the bacterium Escherichia coli play an important role in cell division. A number of different models have been proposed to explain the dynamics from the underlying biochemistry. Here, we extend a previously described discrete polymer model from ...&lt;br/&gt;[Phys. Rev. E 80, 041916] Published Mon Oct 12, 2009</description>
    <dc:creator>Peter Borowski and Eric N. Cytrynbaum</dc:creator>
    <dc:date>2009-10-12T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041916</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041916</dc:source>
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    <prism:publicationDate>2009-10-12T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041916</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041915" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Effects of fluid flow on the oligonucleotide folding in single-walled carbon nanotubes</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041915</link>
    <description>Author(s): M C. G. Lim and Z. W. Zhong&lt;br/&gt;This paper presents molecular-dynamics (MD) simulations of DNA oligonucleotide and water molecules translocating through carbon nanotube (CNT) channels. An induced pressure difference is applied to the system by pushing a layer of water molecules toward the flow direction to drive the oligonucleotid...&lt;br/&gt;[Phys. Rev. E 80, 041915] Published Mon Oct 12, 2009</description>
    <dc:creator>M C. G. Lim and Z. W. Zhong</dc:creator>
    <dc:date>2009-10-12T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041915</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041915</dc:source>
    <dc:format>text/html</dc:format>
    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
    <prism:volume>80</prism:volume>
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    <prism:publicationDate>2009-10-12T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041915</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041914" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Aggregation of fibrils and plaques in amyloid molecular systems</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041914</link>
    <description>Author(s): Mario Nicodemi, Antonio de Candia, and Antonio Coniglio&lt;br/&gt;Amyloidlike proteins form highly organized aggregates, such as fibrils and plaques, preceded by the assembly of a wide range of unstructured oligomers and protofibrils. Despite their importance in a number of human neurodegenerative diseases, a comprehensive understanding of their kinetics and therm...&lt;br/&gt;[Phys. Rev. E 80, 041914] Published Mon Oct 12, 2009</description>
    <dc:creator>Mario Nicodemi, Antonio de Candia, and Antonio Coniglio</dc:creator>
    <dc:date>2009-10-12T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041914</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041914</dc:source>
    <dc:format>text/html</dc:format>
    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
    <prism:volume>80</prism:volume>
    <prism:issueIdentifier>4</prism:issueIdentifier>
    <prism:publicationDate>2009-10-12T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041914</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.042901" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Cell adhesion: The effect of a surprising cohesive force</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.042901</link>
    <description>Author(s): H. Vasseur&lt;br/&gt;When an experimentalist or a biological mechanism applies an external force onto a cell chemically sticking to its substrate, a reacting &#8220;suction&#8221; force, due to the slow penetration of the surrounding fluid between the cell and the substrate, opposes to the dissociation. This force can overcome ...&lt;br/&gt;[Phys. Rev. E 80, 042901] Published Fri Oct 09, 2009</description>
    <dc:creator>H. Vasseur</dc:creator>
    <dc:date>2009-10-09T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.042901</dc:identifier>
    <dc:source>Phys. Rev. E 80, 042901</dc:source>
    <dc:format>text/html</dc:format>
    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
    <prism:volume>80</prism:volume>
    <prism:issueIdentifier>4</prism:issueIdentifier>
    <prism:publicationDate>2009-10-09T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>042901</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041913" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Kinetic overshoot in actin network assembly induced jointly by branching and capping proteins</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041913</link>
    <description>Author(s): Hyeran Kang, Anders E. Carlsson, and Jay X. Tang&lt;br/&gt;We report an experimental study of the kinetics of actin assembly mediated by branching and capping proteins. Our findings confirm the recent prediction of a &#8220;branching explosion&#8221; occurring during polymerization. Fluorescence imaging shows a number of actin filaments with branches within a few m...&lt;br/&gt;[Phys. Rev. E 80, 041913] Published Fri Oct 09, 2009</description>
    <dc:creator>Hyeran Kang, Anders E. Carlsson, and Jay X. Tang</dc:creator>
    <dc:date>2009-10-09T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041913</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041913</dc:source>
    <dc:format>text/html</dc:format>
    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
    <prism:volume>80</prism:volume>
    <prism:issueIdentifier>4</prism:issueIdentifier>
    <prism:publicationDate>2009-10-09T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041913</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041912" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Dynamics of driven recurrent networks of ON and OFF cells</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041912</link>
    <description>Author(s): J&#233;r&#233;mie Lefebvre, Andr&#233; Longtin, and Victor G. LeBlanc&lt;br/&gt;A globally coupled network of ON and OFF cells is studied using neural field theory. ON cells increase their activity when the amplitude of an external stimulus increases, while OFF cells do the opposite given the same stimulus. Theory predicts that, without input, multiple transitions to oscillatio...&lt;br/&gt;[Phys. Rev. E 80, 041912] Published Fri Oct 09, 2009</description>
    <dc:creator>J&#233;r&#233;mie Lefebvre, Andr&#233; Longtin, and Victor G. LeBlanc</dc:creator>
    <dc:date>2009-10-09T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041912</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041912</dc:source>
    <dc:format>text/html</dc:format>
    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
    <prism:volume>80</prism:volume>
    <prism:issueIdentifier>4</prism:issueIdentifier>
    <prism:publicationDate>2009-10-09T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041912</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041911" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Analytical description of Ogston-regime biomolecule separation using nanofilters and nanopores</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041911</link>
    <description>Author(s): Zi Rui Li, Gui Rong Liu, Jongyoon Han, Yuan Cheng, Yu Zong Chen, Jian-Sheng Wang, and Nicolas G. Hadjiconstantinou&lt;br/&gt;We present a theoretical model describing Ogston (pore size comparable to or larger than the characteristic molecular dimension) sieving of rigid isotropic and anisotropic biomolecules in nanofluidic molecular filter arrays comprising of alternating deep and shallow regions. Starting from a quasi-on...&lt;br/&gt;[Phys. Rev. E 80, 041911] Published Thu Oct 08, 2009</description>
    <dc:creator>Zi Rui Li, Gui Rong Liu, Jongyoon Han, Yuan Cheng, Yu Zong Chen, Jian-Sheng Wang, and Nicolas G. Hadjiconstantinou</dc:creator>
    <dc:date>2009-10-08T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041911</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041911</dc:source>
    <dc:format>text/html</dc:format>
    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
    <prism:volume>80</prism:volume>
    <prism:issueIdentifier>4</prism:issueIdentifier>
    <prism:publicationDate>2009-10-08T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041911</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
  <item rdf:about="http://link.aps.org/doi/10.1103/PhysRevE.80.041910" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/" xmlns:dc="http://purl.org/dc/elements/1.1/">
    <title>Adsorption of a hydrophobic-polar-model heteropolymer in an attractive nanotube</title>
    <link>http://link.aps.org/doi/10.1103/PhysRevE.80.041910</link>
    <description>Author(s): Handan Arkin&lt;br/&gt;The adsorption of an off-lattice hydrophobic-polar-model heteropolymer in an attractive hydrophobic nanotube is presented by means of a multicanonical Monte Carlo simulation. In the model, the Lennard-Jones potential is assumed as an interaction potential between the effective monomers and the nanot...&lt;br/&gt;[Phys. Rev. E 80, 041910] Published Thu Oct 08, 2009</description>
    <dc:creator>Handan Arkin</dc:creator>
    <dc:date>2009-10-08T00:00:00-04:00</dc:date>
    <dc:rights>Personal use only, all commercial or other reuse prohibited</dc:rights>
    <dc:identifier>10.1103/PhysRevE.80.041910</dc:identifier>
    <dc:source>Phys. Rev. E 80, 041910</dc:source>
    <dc:format>text/html</dc:format>
    <dc:type>article</dc:type>
    <prism:publicationName>Physical Review E</prism:publicationName>
    <prism:volume>80</prism:volume>
    <prism:issueIdentifier>4</prism:issueIdentifier>
    <prism:publicationDate>2009-10-08T00:00:00-04:00</prism:publicationDate>
    <prism:startingPage>041910</prism:startingPage>
    <dc:subject>Biological physics</dc:subject>
    <prism:section>Biological physics</prism:section>
  </item>
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